I don't know what your experiance with WBM's boxer twins is so excuse me if I'm teaching you to suck eggs....................
Forget fuel controllers for now and start with the basics. The 1200s do not particualry have an issue with poor fuelling and certainly, as a rule, have no issues with surging. Remaps will optomise the fueling for sure but we're talking further improvements to the engine not ironing out fuelling 'issues'.
So, first thing is you will not get the bike to trickle through traffic, nor have fine throttle control at low speeds without feathering the clutch. You have two big feck off pistons in thet engine AND shaft drive which makes the engine feel very 'connected' at low revs.
Next is to check the engine set up and even things as obvious as throttle cable routing, condition etc. I know you've had the bike serviced recently but that's no guarantee it's been done well. Having the throttle bodies balanced, valve clearances and end float spot on make for a very smooth engine (for a big twin).
If, after all that, you still have issues then yes look at the fuelling by all means but that's the last thing I'd be looking at.
Andres